Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lysmd1Q9D0E3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd1Q9D0E3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd1Q9D0E3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd1Q9D0E3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Lysmd1Q9D0E3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Lysmd1Q9D0E3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd1Q9D0E3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Gm9727-201ENSMUST00000161387 555 ntBASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd1Q9D0E3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Gm25911-201ENSMUST00000157621 56 ntBASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd1Q9D0E3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd1Q9D0E3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Gm14140-201ENSMUST00000119999 995 ntBASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Lysmd1Q9D0E3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms