Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Hcfc1r1Q9CYQ5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Gm12821-201ENSMUST00000120022 600 ntBASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1r1Q9CYQ5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1r1Q9CYQ5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1r1Q9CYQ5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms