Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf135Q9CWS1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf135Q9CWS1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Trmt13-210ENSMUST00000198454 880 ntBASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rnf135Q9CWS1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Gm38285-201ENSMUST00000192928 922 ntBASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf135Q9CWS1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf135Q9CWS1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf135Q9CWS1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf135Q9CWS1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Gm2399-201ENSMUST00000104944 225 ntBASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf135Q9CWS1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf135Q9CWS1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf135Q9CWS1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Rnf135Q9CWS1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms