Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Q9CR55 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.33■□□□□ 0.21
Q9CR55 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Q9CR55 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q9CR55 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q9CR55 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q9CR55 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Q9CR55 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.33■□□□□ 0.2
Q9CR55 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.33■□□□□ 0.2
Q9CR55 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Q9CR55 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.33■□□□□ 0.2
Q9CR55 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Q9CR55 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q9CR55 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.32■□□□□ 0.2
Q9CR55 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Q9CR55 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Q9CR55 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.32■□□□□ 0.2
Q9CR55 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CR55 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.31■□□□□ 0.2
Q9CR55 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Q9CR55 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q9CR55 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Q9CR55 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q9CR55 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.31■□□□□ 0.2
Q9CR55 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CR55 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.3■□□□□ 0.2
Q9CR55 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.3■□□□□ 0.2
Q9CR55 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CR55 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Q9CR55 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.3■□□□□ 0.2
Q9CR55 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.29■□□□□ 0.2
Q9CR55 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.29■□□□□ 0.2
Q9CR55 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Q9CR55 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.29■□□□□ 0.2
Q9CR55 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms