Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf111Q99ML9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf111Q99ML9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf111Q99ML9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.05■□□□□ 0.32
Rnf111Q99ML9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Idnk-204ENSMUST00000226010 1898 ntBASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.04■□□□□ 0.32
Rnf111Q99ML9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.03■□□□□ 0.32
Rnf111Q99ML9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf111Q99ML9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf111Q99ML9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf111Q99ML9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rnf111Q99ML9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Rnf111Q99ML9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms