Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx6-1Q99MA9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Gm5867-201ENSMUST00000063197 592 ntBASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Nkx6-1Q99MA9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nkx6-1Q99MA9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nkx6-1Q99MA9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nkx6-1Q99MA9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.4■□□□□ 0.22
Nkx6-1Q99MA9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms