Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdca3Q99M54 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Mir1199-201ENSMUST00000117015 119 ntBASIC16.32■□□□□ 0.2
Cdca3Q99M54 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.32■□□□□ 0.2
Cdca3Q99M54 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.32■□□□□ 0.2
Cdca3Q99M54 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdca3Q99M54 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdca3Q99M54 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.31■□□□□ 0.2
Cdca3Q99M54 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdca3Q99M54 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.3■□□□□ 0.2
Cdca3Q99M54 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdca3Q99M54 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Gm13158-201ENSMUST00000122007 736 ntBASIC16.29■□□□□ 0.2
Cdca3Q99M54 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.29■□□□□ 0.2
Cdca3Q99M54 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.29■□□□□ 0.2
Cdca3Q99M54 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdca3Q99M54 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdca3Q99M54 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdca3Q99M54 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.28■□□□□ 0.2
Cdca3Q99M54 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms