Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1b1Q99LU0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chmp1b1Q99LU0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.63■□□□□ 0.25
Chmp1b1Q99LU0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1b1Q99LU0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp1b1Q99LU0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Gm2399-201ENSMUST00000104944 225 ntBASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp1b1Q99LU0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp1b1Q99LU0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Gm12441-201ENSMUST00000121806 588 ntBASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Gm44549-201ENSMUST00000208351 577 ntBASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Tgds-204ENSMUST00000228543 1594 ntBASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp1b1Q99LU0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp1b1Q99LU0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms