Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Mir3081-201ENSMUST00000175305 84 ntBASIC18.56■□□□□ 0.56
Clp1Q99LI9 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.56■□□□□ 0.56
Clp1Q99LI9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.56■□□□□ 0.56
Clp1Q99LI9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Gm10566-201ENSMUST00000086739 996 ntBASIC18.56■□□□□ 0.56
Clp1Q99LI9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clp1Q99LI9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clp1Q99LI9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clp1Q99LI9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.54■□□□□ 0.56
Clp1Q99LI9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.54■□□□□ 0.56
Clp1Q99LI9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Gm27742-201ENSMUST00000184667 60 ntBASIC18.54■□□□□ 0.56
Clp1Q99LI9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.54■□□□□ 0.56
Clp1Q99LI9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.54■□□□□ 0.56
Clp1Q99LI9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Actl10-202ENSMUST00000226583 1501 ntBASIC18.54■□□□□ 0.56
Clp1Q99LI9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clp1Q99LI9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.53■□□□□ 0.56
Clp1Q99LI9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clp1Q99LI9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.53■□□□□ 0.56
Clp1Q99LI9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clp1Q99LI9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.52■□□□□ 0.56
Clp1Q99LI9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clp1Q99LI9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.52■□□□□ 0.55
Clp1Q99LI9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.52■□□□□ 0.55
Clp1Q99LI9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Clp1Q99LI9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clp1Q99LI9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clp1Q99LI9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms