Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc1bQ920F6 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.24■□□□□ 0.83
Smc1bQ920F6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Gm37292-201ENSMUST00000192062 758 ntBASIC20.24■□□□□ 0.83
Smc1bQ920F6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc1bQ920F6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Gm33142-201ENSMUST00000193913 867 ntBASIC20.23■□□□□ 0.83
Smc1bQ920F6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc1bQ920F6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Gm10013-201ENSMUST00000106074 672 ntBASIC20.22■□□□□ 0.83
Smc1bQ920F6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 AA414768-201ENSMUST00000121924 1257 ntBASIC20.22■□□□□ 0.83
Smc1bQ920F6 Gm18959-201ENSMUST00000208954 655 ntBASIC20.22■□□□□ 0.83
Smc1bQ920F6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.22■□□□□ 0.83
Smc1bQ920F6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc1bQ920F6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.22■□□□□ 0.83
Smc1bQ920F6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc1bQ920F6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Gm6345-202ENSMUST00000180900 204 ntBASIC20.21■□□□□ 0.83
Smc1bQ920F6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Smc1bQ920F6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc1bQ920F6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Smc1bQ920F6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc1bQ920F6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc1bQ920F6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms