Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb13Q91Y06 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb13Q91Y06 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Gm15375-201ENSMUST00000119510 849 ntBASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Mir8112-201ENSMUST00000184382 131 ntBASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Gm20049-201ENSMUST00000219950 730 ntBASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb13Q91Y06 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Gm27275-201ENSMUST00000184318 272 ntBASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb13Q91Y06 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Gm13401-201ENSMUST00000117074 291 ntBASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb13Q91Y06 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb13Q91Y06 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms