Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb18Q91Y02 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.39■□□□□ 0.53
Pcdhb18Q91Y02 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Gm38027-201ENSMUST00000192315 235 ntBASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb18Q91Y02 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Gm45058-201ENSMUST00000205810 766 ntBASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Gm7367-201ENSMUST00000057611 492 ntBASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb18Q91Y02 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb18Q91Y02 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Gm2274-201ENSMUST00000184539 609 ntBASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb18Q91Y02 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Mir5130-201ENSMUST00000175160 84 ntBASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Gm4974-201ENSMUST00000209974 875 ntBASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb18Q91Y02 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb18Q91Y02 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb18Q91Y02 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdhb18Q91Y02 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdhb18Q91Y02 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb18Q91Y02 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms