Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb22Q91XZ8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhb22Q91XZ8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb22Q91XZ8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb22Q91XZ8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb22Q91XZ8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb22Q91XZ8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhb22Q91XZ8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb22Q91XZ8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb22Q91XZ8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Gm715-201ENSMUST00000117865 831 ntBASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Pcdhb22Q91XZ8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhb22Q91XZ8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb22Q91XZ8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb22Q91XZ8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Gm24841-201ENSMUST00000158676 357 ntBASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb22Q91XZ8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms