Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb3Q91XZ7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb3Q91XZ7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Gm7860-201ENSMUST00000121190 879 ntBASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb3Q91XZ7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb3Q91XZ7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb3Q91XZ7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb3Q91XZ7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb3Q91XZ7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb3Q91XZ7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb3Q91XZ7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb3Q91XZ7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb3Q91XZ7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb3Q91XZ7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms