Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga6Q91XY2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga6Q91XY2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga6Q91XY2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Gm2274-201ENSMUST00000184539 609 ntBASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Gm17971-201ENSMUST00000190239 806 ntBASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhga6Q91XY2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhga6Q91XY2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Gm7284-201ENSMUST00000131667 944 ntBASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms