Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgb5Q91XX5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Pcdhgb5Q91XX5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Pcdhgb5Q91XX5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 AA414768-201ENSMUST00000121924 1257 ntBASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgb5Q91XX5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Gm16061-201ENSMUST00000122167 857 ntBASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Gm13474-201ENSMUST00000122466 815 ntBASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgb5Q91XX5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Gm24841-201ENSMUST00000158676 357 ntBASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Gm22697-201ENSMUST00000175194 63 ntBASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhgb5Q91XX5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Gm7638-201ENSMUST00000121348 967 ntBASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhgb5Q91XX5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Gm13401-201ENSMUST00000117074 291 ntBASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgb5Q91XX5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms