Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Uhrf1Q8VDF2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Uhrf1Q8VDF2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Uhrf1Q8VDF2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Gm11950-201ENSMUST00000121615 838 ntBASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Gm7461-201ENSMUST00000058918 827 ntBASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Uhrf1Q8VDF2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Gm26039-201ENSMUST00000158152 144 ntBASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Uhrf1Q8VDF2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Gm7153-201ENSMUST00000117092 455 ntBASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Uhrf1Q8VDF2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Gm18958-201ENSMUST00000174258 762 ntBASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Gm10566-201ENSMUST00000086739 996 ntBASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Uhrf1Q8VDF2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.1■□□□□ 0.49
Uhrf1Q8VDF2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Uhrf1Q8VDF2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.09■□□□□ 0.49
Uhrf1Q8VDF2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Uhrf1Q8VDF2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.09■□□□□ 0.49
Uhrf1Q8VDF2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Uhrf1Q8VDF2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Uhrf1Q8VDF2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms