Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Idnk-204ENSMUST00000226010 1898 ntBASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rpusd1Q8VCZ8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Gm33142-201ENSMUST00000193913 867 ntBASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Gm9731-201ENSMUST00000209480 747 ntBASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.78■□□□□ 0.28
Rpusd1Q8VCZ8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Il3ra-202ENSMUST00000223589 738 ntBASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rpusd1Q8VCZ8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpusd1Q8VCZ8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rpusd1Q8VCZ8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Rpusd1Q8VCZ8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpusd1Q8VCZ8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rpusd1Q8VCZ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Gm7370-201ENSMUST00000219471 767 ntBASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rpusd1Q8VCZ8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rpusd1Q8VCZ8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpusd1Q8VCZ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpusd1Q8VCZ8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Rpusd1Q8VCZ8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpusd1Q8VCZ8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rpusd1Q8VCZ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms