Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dnajc28Q8VCE1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dnajc28Q8VCE1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Dnajc28Q8VCE1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Gm7889-201ENSMUST00000185591 958 ntBASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dnajc28Q8VCE1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Fst-202ENSMUST00000223640 2612 ntBASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dnajc28Q8VCE1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dnajc28Q8VCE1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dnajc28Q8VCE1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dnajc28Q8VCE1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dnajc28Q8VCE1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dnajc28Q8VCE1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms