Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup35Q8R4R6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Gm45417-201ENSMUST00000209533 758 ntBASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup35Q8R4R6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nup35Q8R4R6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.34□□□□□ -0.11
Nup35Q8R4R6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.34□□□□□ -0.11
Nup35Q8R4R6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms