Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chrna3Q8R4G9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chrna3Q8R4G9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chrna3Q8R4G9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chrna3Q8R4G9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna3Q8R4G9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Chrna3Q8R4G9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna3Q8R4G9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Timm23-208ENSMUST00000226683 750 ntBASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms