Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Vmn1r89-206ENSMUST00000227319 985 ntBASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacnb1Q8R3Z5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacnb1Q8R3Z5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.69■□□□□ 0.74
Cacnb1Q8R3Z5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Gm45071-201ENSMUST00000205353 571 ntBASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC19.68■□□□□ 0.74
Cacnb1Q8R3Z5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 AC159246.1-201ENSMUST00000214478 249 ntBASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 Gm43981-201ENSMUST00000203285 1467 ntBASIC19.67■□□□□ 0.74
Cacnb1Q8R3Z5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Gm13158-201ENSMUST00000122007 736 ntBASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cacnb1Q8R3Z5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms