Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdlim2Q8R1G6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.23■□□□□ 0.83
Pdlim2Q8R1G6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.22■□□□□ 0.83
Pdlim2Q8R1G6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Gm45102-201ENSMUST00000207427 857 ntBASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim2Q8R1G6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pdlim2Q8R1G6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim2Q8R1G6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Gm27801-201ENSMUST00000184174 223 ntBASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim2Q8R1G6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.18■□□□□ 0.82
Pdlim2Q8R1G6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms