Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Alms1Q8K4E0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alms1Q8K4E0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alms1Q8K4E0 Gm7153-201ENSMUST00000117092 455 ntBASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Gm27704-201ENSMUST00000185094 107 ntBASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alms1Q8K4E0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alms1Q8K4E0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Alms1Q8K4E0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Gm2274-201ENSMUST00000184539 609 ntBASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Gm17807-201ENSMUST00000186869 298 ntBASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alms1Q8K4E0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alms1Q8K4E0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Alms1Q8K4E0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alms1Q8K4E0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alms1Q8K4E0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alms1Q8K4E0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.12■□□□□ 0.33
Alms1Q8K4E0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms