Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lgi3Q8K406 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.1■□□□□ 0.01
Lgi3Q8K406 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Gm8969-201ENSMUST00000199694 526 ntBASIC15.1■□□□□ 0.01
Lgi3Q8K406 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lgi3Q8K406 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Gm10849-201ENSMUST00000100397 618 ntBASIC15.09■□□□□ 0.01
Lgi3Q8K406 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.09■□□□□ 0.01
Lgi3Q8K406 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.09■□□□□ 0.01
Lgi3Q8K406 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.09■□□□□ 0.01
Lgi3Q8K406 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lgi3Q8K406 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lgi3Q8K406 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lgi3Q8K406 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lgi3Q8K406 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lgi3Q8K406 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lgi3Q8K406 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.08■□□□□ 0
Lgi3Q8K406 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Lgi3Q8K406 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.08■□□□□ 0
Lgi3Q8K406 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Lgi3Q8K406 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lgi3Q8K406 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.07■□□□□ 0
Lgi3Q8K406 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lgi3Q8K406 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lgi3Q8K406 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.07■□□□□ 0
Lgi3Q8K406 Gm6211-202ENSMUST00000167849 925 ntBASIC15.07■□□□□ 0
Lgi3Q8K406 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lgi3Q8K406 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.07■□□□□ 0
Lgi3Q8K406 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lgi3Q8K406 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Lgi3Q8K406 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lgi3Q8K406 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lgi3Q8K406 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lgi3Q8K406 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lgi3Q8K406 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.06■□□□□ 0
Lgi3Q8K406 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lgi3Q8K406 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lgi3Q8K406 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms