Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtn1Q8K0T0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.29■□□□□ 0.84
Rtn1Q8K0T0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtn1Q8K0T0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtn1Q8K0T0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtn1Q8K0T0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtn1Q8K0T0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Rtn1Q8K0T0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtn1Q8K0T0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms