Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scamp1Q8K021 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scamp1Q8K021 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.21■□□□□ 0.35
Scamp1Q8K021 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.21■□□□□ 0.35
Scamp1Q8K021 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scamp1Q8K021 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Scamp1Q8K021 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Scamp1Q8K021 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.2■□□□□ 0.34
Scamp1Q8K021 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.2■□□□□ 0.34
Scamp1Q8K021 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.2■□□□□ 0.34
Scamp1Q8K021 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.2■□□□□ 0.34
Scamp1Q8K021 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scamp1Q8K021 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Gm13401-201ENSMUST00000117074 291 ntBASIC17.19■□□□□ 0.34
Scamp1Q8K021 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scamp1Q8K021 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Gm6433-201ENSMUST00000118634 875 ntBASIC17.18■□□□□ 0.34
Scamp1Q8K021 Gm7889-201ENSMUST00000185591 958 ntBASIC17.18■□□□□ 0.34
Scamp1Q8K021 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.18■□□□□ 0.34
Scamp1Q8K021 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scamp1Q8K021 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scamp1Q8K021 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms