Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Gm15375-201ENSMUST00000119510 849 ntBASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfwd3Q8CIK8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Mir2861-201ENSMUST00000175539 82 ntBASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfwd3Q8CIK8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfwd3Q8CIK8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfwd3Q8CIK8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfwd3Q8CIK8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Gm22240-201ENSMUST00000175225 82 ntBASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfwd3Q8CIK8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms