Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rbm28Q8CGC6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rbm28Q8CGC6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rbm28Q8CGC6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rbm28Q8CGC6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rbm28Q8CGC6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rbm28Q8CGC6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Gm10231-201ENSMUST00000181584 441 ntBASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Gm10175-202ENSMUST00000208752 441 ntBASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rbm28Q8CGC6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rbm28Q8CGC6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Gm11539-201ENSMUST00000119837 557 ntBASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Gm13436-201ENSMUST00000120418 567 ntBASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Gm13559-201ENSMUST00000120476 863 ntBASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rbm28Q8CGC6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms