Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Gm26524-201ENSMUST00000192339 390 ntBASIC21.79■■□□□ 1.08
Smc5Q8CG46 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.79■■□□□ 1.08
Smc5Q8CG46 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc5Q8CG46 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.78■■□□□ 1.08
Smc5Q8CG46 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Gm13148-201ENSMUST00000118892 745 ntBASIC21.78■■□□□ 1.08
Smc5Q8CG46 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc5Q8CG46 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc5Q8CG46 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smc5Q8CG46 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Smc5Q8CG46 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.76■■□□□ 1.07
Smc5Q8CG46 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc5Q8CG46 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smc5Q8CG46 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Flg-201ENSMUST00000050758 1488 ntBASIC21.75■■□□□ 1.07
Smc5Q8CG46 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc5Q8CG46 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc5Q8CG46 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.73■■□□□ 1.07
Smc5Q8CG46 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc5Q8CG46 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Gm11927-201ENSMUST00000118472 759 ntBASIC21.72■■□□□ 1.07
Smc5Q8CG46 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.72■■□□□ 1.07
Smc5Q8CG46 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms