Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.4■□□□□ 0.38
Ccdc28bQ8CEG5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc28bQ8CEG5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc28bQ8CEG5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Gm43017-201ENSMUST00000198296 752 ntBASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc28bQ8CEG5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc28bQ8CEG5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc28bQ8CEG5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc28bQ8CEG5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc28bQ8CEG5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc28bQ8CEG5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc28bQ8CEG5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc28bQ8CEG5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc28bQ8CEG5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc28bQ8CEG5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms