Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Gm33142-201ENSMUST00000193913 867 ntBASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Gm21559-201ENSMUST00000220638 855 ntBASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Gm8587-201ENSMUST00000076538 843 ntBASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Trim52Q8CDV4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim52Q8CDV4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim52Q8CDV4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim52Q8CDV4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim52Q8CDV4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim52Q8CDV4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim52Q8CDV4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.8■■□□□ 1.08
Trim52Q8CDV4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim52Q8CDV4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Gm7213-201ENSMUST00000215977 950 ntBASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Trim52Q8CDV4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim52Q8CDV4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim52Q8CDV4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Gm27389-201ENSMUST00000183622 195 ntBASIC21.75■■□□□ 1.07
Trim52Q8CDV4 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim52Q8CDV4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim52Q8CDV4 Gm25016-201ENSMUST00000158399 131 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms