Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd4Q8CC84 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd4Q8CC84 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.8■□□□□ 0.12
Lysmd4Q8CC84 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd4Q8CC84 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd4Q8CC84 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.77■□□□□ 0.12
Lysmd4Q8CC84 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lysmd4Q8CC84 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lysmd4Q8CC84 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms