Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.53■□□□□ 0.56
Uba3Q8C878 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Uba3Q8C878 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Uba3Q8C878 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Uba3Q8C878 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.53■□□□□ 0.56
Uba3Q8C878 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Uba3Q8C878 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Uba3Q8C878 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Gm10418-201ENSMUST00000100943 576 ntBASIC18.52■□□□□ 0.56
Uba3Q8C878 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.52■□□□□ 0.56
Uba3Q8C878 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Uba3Q8C878 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Uba3Q8C878 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Uba3Q8C878 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Uba3Q8C878 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Uba3Q8C878 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Uba3Q8C878 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Uba3Q8C878 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Uba3Q8C878 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.51■□□□□ 0.55
Uba3Q8C878 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Uba3Q8C878 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.51■□□□□ 0.55
Uba3Q8C878 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Uba3Q8C878 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.5■□□□□ 0.55
Uba3Q8C878 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.5■□□□□ 0.55
Uba3Q8C878 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.5■□□□□ 0.55
Uba3Q8C878 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.5■□□□□ 0.55
Uba3Q8C878 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.5■□□□□ 0.55
Uba3Q8C878 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.5■□□□□ 0.55
Uba3Q8C878 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Uba3Q8C878 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Mir1199-201ENSMUST00000117015 119 ntBASIC18.49■□□□□ 0.55
Uba3Q8C878 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.49■□□□□ 0.55
Uba3Q8C878 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Uba3Q8C878 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Uba3Q8C878 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.48■□□□□ 0.55
Uba3Q8C878 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Uba3Q8C878 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Uba3Q8C878 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.48■□□□□ 0.55
Uba3Q8C878 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.48■□□□□ 0.55
Uba3Q8C878 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Uba3Q8C878 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms