Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx6Q8C7R7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx6Q8C7R7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 AV356131-201ENSMUST00000206201 750 ntBASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rfx6Q8C7R7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Gm5874-201ENSMUST00000096101 508 ntBASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx6Q8C7R7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rfx6Q8C7R7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rfx6Q8C7R7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms