Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim35Q8C006 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim35Q8C006 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trim35Q8C006 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim35Q8C006 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim35Q8C006 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim35Q8C006 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim35Q8C006 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim35Q8C006 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Trim35Q8C006 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim35Q8C006 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim35Q8C006 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim35Q8C006 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.1■□□□□ 0.49
Trim35Q8C006 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.1■□□□□ 0.49
Trim35Q8C006 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Gm44975-201ENSMUST00000207435 1390 ntBASIC18.1■□□□□ 0.49
Trim35Q8C006 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.1■□□□□ 0.49
Trim35Q8C006 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Gm43811-201ENSMUST00000202862 695 ntBASIC18.1■□□□□ 0.49
Trim35Q8C006 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim35Q8C006 AC153801.1-201ENSMUST00000217904 947 ntBASIC18.1■□□□□ 0.49
Trim35Q8C006 CT009713.1-201ENSMUST00000224828 853 ntBASIC18.1■□□□□ 0.49
Trim35Q8C006 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim35Q8C006 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim35Q8C006 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Gm5656-201ENSMUST00000171020 1096 ntBASIC18.09■□□□□ 0.49
Trim35Q8C006 Gm5264-201ENSMUST00000190584 848 ntBASIC18.09■□□□□ 0.49
Trim35Q8C006 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC18.09■□□□□ 0.49
Trim35Q8C006 AC163038.1-201ENSMUST00000223632 1142 ntBASIC18.09■□□□□ 0.49
Trim35Q8C006 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim35Q8C006 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.09■□□□□ 0.49
Trim35Q8C006 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim35Q8C006 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim35Q8C006 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trim35Q8C006 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trim35Q8C006 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim35Q8C006 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Gm26524-201ENSMUST00000192339 390 ntBASIC18.08■□□□□ 0.48
Trim35Q8C006 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Trim35Q8C006 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Gm43980-201ENSMUST00000204899 1612 ntBASIC18.08■□□□□ 0.48
Trim35Q8C006 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim35Q8C006 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms