Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc44a2Q8BY89 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.11■□□□□ 0.33
Slc44a2Q8BY89 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Gm13534-201ENSMUST00000121169 513 ntBASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 AV356131-201ENSMUST00000206201 750 ntBASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Slc44a2Q8BY89 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc44a2Q8BY89 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a2Q8BY89 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Gm26571-201ENSMUST00000181399 666 ntBASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Gm42569-201ENSMUST00000200539 472 ntBASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Gm7514-201ENSMUST00000209475 934 ntBASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a2Q8BY89 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms