Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trank1Q8BV79 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.18■□□□□ 0.02
Trank1Q8BV79 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trank1Q8BV79 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trank1Q8BV79 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.18■□□□□ 0.02
Trank1Q8BV79 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trank1Q8BV79 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trank1Q8BV79 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.16■□□□□ 0.02
Trank1Q8BV79 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.16■□□□□ 0.02
Trank1Q8BV79 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trank1Q8BV79 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Gm26039-201ENSMUST00000158152 144 ntBASIC15.15■□□□□ 0.02
Trank1Q8BV79 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.15■□□□□ 0.02
Trank1Q8BV79 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Gm37722-201ENSMUST00000193757 208 ntBASIC15.14■□□□□ 0.01
Trank1Q8BV79 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.14■□□□□ 0.01
Trank1Q8BV79 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.14■□□□□ 0.01
Trank1Q8BV79 Gm18206-201ENSMUST00000207027 926 ntBASIC15.14■□□□□ 0.01
Trank1Q8BV79 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trank1Q8BV79 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.13■□□□□ 0.01
Trank1Q8BV79 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trank1Q8BV79 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.13■□□□□ 0.01
Trank1Q8BV79 Gm13884-201ENSMUST00000118103 829 ntBASIC15.12■□□□□ 0.01
Trank1Q8BV79 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trank1Q8BV79 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms