Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col16a1Q8BLX7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col16a1Q8BLX7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col16a1Q8BLX7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col16a1Q8BLX7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col16a1Q8BLX7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Gm6623-201ENSMUST00000173570 544 ntBASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 AW822252-206ENSMUST00000208904 237 ntBASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col16a1Q8BLX7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col16a1Q8BLX7 Golph3-205ENSMUST00000228671 2842 ntBASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Birc2-201ENSMUST00000054878 378 ntBASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC23.13■■□□□ 1.29
Col16a1Q8BLX7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Col16a1Q8BLX7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC23.12■■□□□ 1.29
Col16a1Q8BLX7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC23.12■■□□□ 1.29
Col16a1Q8BLX7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC23.12■■□□□ 1.29
Col16a1Q8BLX7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col16a1Q8BLX7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col16a1Q8BLX7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms