Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Mir7075-201ENSMUST00000184187 82 ntBASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn3bQ8BHK2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn3bQ8BHK2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Scn3bQ8BHK2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Scn3bQ8BHK2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Gm22325-201ENSMUST00000158904 308 ntBASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Gm8493-201ENSMUST00000196881 489 ntBASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms