Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Depdc1bQ8BH88 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Gm11249-201ENSMUST00000117071 859 ntBASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Depdc1bQ8BH88 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Depdc1bQ8BH88 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Depdc1bQ8BH88 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.08■□□□□ 0.65
Depdc1bQ8BH88 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Depdc1bQ8BH88 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Depdc1bQ8BH88 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Depdc1bQ8BH88 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Flg-201ENSMUST00000050758 1488 ntBASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Depdc1bQ8BH88 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Depdc1bQ8BH88 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Depdc1bQ8BH88 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms