Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnrc18Q80WC3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.55■□□□□ 0.4
Tnrc18Q80WC3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnrc18Q80WC3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnrc18Q80WC3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnrc18Q80WC3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tnrc18Q80WC3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnrc18Q80WC3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnrc18Q80WC3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnrc18Q80WC3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.52■□□□□ 0.39
Tnrc18Q80WC3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnrc18Q80WC3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnrc18Q80WC3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tnrc18Q80WC3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnrc18Q80WC3 Notumos-201ENSMUST00000151998 2659 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms