Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.27■□□□□ 0.84
Prpf40bQ80W14 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Gm7461-201ENSMUST00000058918 827 ntBASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.27■□□□□ 0.84
Prpf40bQ80W14 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf40bQ80W14 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf40bQ80W14 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf40bQ80W14 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.25■□□□□ 0.83
Prpf40bQ80W14 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf40bQ80W14 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Gm17971-201ENSMUST00000190239 806 ntBASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Prpf40bQ80W14 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf40bQ80W14 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms