Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3tc2Q80VA5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3tc2Q80VA5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Gm2274-201ENSMUST00000184539 609 ntBASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3tc2Q80VA5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh3tc2Q80VA5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Gm22697-201ENSMUST00000175194 63 ntBASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Gm18101-201ENSMUST00000215769 548 ntBASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3tc2Q80VA5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3tc2Q80VA5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc2Q80VA5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc2Q80VA5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3tc2Q80VA5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sh3tc2Q80VA5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sh3tc2Q80VA5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3tc2Q80VA5 Mir2861-201ENSMUST00000175539 82 ntBASIC19.08■□□□□ 0.64
Sh3tc2Q80VA5 Gm38027-201ENSMUST00000192315 235 ntBASIC19.08■□□□□ 0.64
Sh3tc2Q80VA5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Sh3tc2Q80VA5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms