Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Gm27275-201ENSMUST00000184318 272 ntBASIC17.13■□□□□ 0.33
Scn4bQ7M729 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn4bQ7M729 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Scn4bQ7M729 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.12■□□□□ 0.33
Scn4bQ7M729 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Scn4bQ7M729 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.11■□□□□ 0.33
Scn4bQ7M729 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Gm12527-201ENSMUST00000117967 564 ntBASIC17.11■□□□□ 0.33
Scn4bQ7M729 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.11■□□□□ 0.33
Scn4bQ7M729 Gm10138-203ENSMUST00000206952 366 ntBASIC17.11■□□□□ 0.33
Scn4bQ7M729 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn4bQ7M729 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Gm10418-201ENSMUST00000100943 576 ntBASIC17.1■□□□□ 0.33
Scn4bQ7M729 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.1■□□□□ 0.33
Scn4bQ7M729 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.1■□□□□ 0.33
Scn4bQ7M729 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.1■□□□□ 0.33
Scn4bQ7M729 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn4bQ7M729 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Mir6349-201ENSMUST00000184059 97 ntBASIC17.09■□□□□ 0.33
Scn4bQ7M729 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn4bQ7M729 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Scn4bQ7M729 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn4bQ7M729 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms