Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox11Q7M6Y2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Sox11Q7M6Y2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.78■□□□□ 0.44
Sox11Q7M6Y2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox11Q7M6Y2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox11Q7M6Y2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox11Q7M6Y2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox11Q7M6Y2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox11Q7M6Y2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sox11Q7M6Y2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox11Q7M6Y2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox11Q7M6Y2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox11Q7M6Y2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
Sox11Q7M6Y2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms