Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nup188Q6ZQH8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nup188Q6ZQH8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.93■□□□□ 0.94
Nup188Q6ZQH8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Gm6443-201ENSMUST00000203599 874 ntBASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.92■□□□□ 0.94
Nup188Q6ZQH8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Idnk-204ENSMUST00000226010 1898 ntBASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.91■□□□□ 0.94
Nup188Q6ZQH8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Gm27742-201ENSMUST00000184667 60 ntBASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nup188Q6ZQH8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nup188Q6ZQH8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nup188Q6ZQH8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nup188Q6ZQH8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nup188Q6ZQH8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nup188Q6ZQH8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nup188Q6ZQH8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.89■□□□□ 0.93
Nup188Q6ZQH8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nup188Q6ZQH8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms