Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ddx58Q6Q899 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.78■■□□□ 1.08
Ddx58Q6Q899 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx58Q6Q899 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx58Q6Q899 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.77■■□□□ 1.08
Ddx58Q6Q899 Gm37025-201ENSMUST00000195159 829 ntBASIC21.77■■□□□ 1.08
Ddx58Q6Q899 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx58Q6Q899 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx58Q6Q899 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Mir8112-201ENSMUST00000184382 131 ntBASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx58Q6Q899 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Mir5130-201ENSMUST00000175160 84 ntBASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Gm9731-201ENSMUST00000209480 747 ntBASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx58Q6Q899 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx58Q6Q899 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Gm18032-201ENSMUST00000222541 538 ntBASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx58Q6Q899 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Il3ra-202ENSMUST00000223589 738 ntBASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx58Q6Q899 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Gm16061-201ENSMUST00000122167 857 ntBASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx58Q6Q899 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms