Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ShbQ6PD21 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.06■□□□□ 0.64
ShbQ6PD21 Gm1401-201ENSMUST00000122048 772 ntBASIC19.06■□□□□ 0.64
ShbQ6PD21 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.06■□□□□ 0.64
ShbQ6PD21 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.06■□□□□ 0.64
ShbQ6PD21 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.06■□□□□ 0.64
ShbQ6PD21 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.06■□□□□ 0.64
ShbQ6PD21 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.06■□□□□ 0.64
ShbQ6PD21 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ShbQ6PD21 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ShbQ6PD21 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
ShbQ6PD21 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.05■□□□□ 0.64
ShbQ6PD21 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.05■□□□□ 0.64
ShbQ6PD21 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ShbQ6PD21 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.05■□□□□ 0.64
ShbQ6PD21 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ShbQ6PD21 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.05■□□□□ 0.64
ShbQ6PD21 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ShbQ6PD21 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.04■□□□□ 0.64
ShbQ6PD21 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.04■□□□□ 0.64
ShbQ6PD21 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ShbQ6PD21 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.04■□□□□ 0.64
ShbQ6PD21 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ShbQ6PD21 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ShbQ6PD21 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ShbQ6PD21 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ShbQ6PD21 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ShbQ6PD21 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ShbQ6PD21 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ShbQ6PD21 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.03■□□□□ 0.64
ShbQ6PD21 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.03■□□□□ 0.64
ShbQ6PD21 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ShbQ6PD21 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ShbQ6PD21 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ShbQ6PD21 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShbQ6PD21 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShbQ6PD21 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ShbQ6PD21 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ShbQ6PD21 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ShbQ6PD21 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.02■□□□□ 0.64
ShbQ6PD21 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ShbQ6PD21 Rps4l-201ENSMUST00000071745 943 ntBASIC19.02■□□□□ 0.64
ShbQ6PD21 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
ShbQ6PD21 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ShbQ6PD21 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.02■□□□□ 0.63
ShbQ6PD21 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
ShbQ6PD21 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
ShbQ6PD21 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ShbQ6PD21 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ShbQ6PD21 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ShbQ6PD21 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.01■□□□□ 0.63
ShbQ6PD21 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ShbQ6PD21 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShbQ6PD21 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShbQ6PD21 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ShbQ6PD21 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.01■□□□□ 0.63
ShbQ6PD21 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShbQ6PD21 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShbQ6PD21 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
ShbQ6PD21 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19■□□□□ 0.63
ShbQ6PD21 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ShbQ6PD21 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms