Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.21■□□□□ 0.35
Six3Q62233 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.21■□□□□ 0.35
Six3Q62233 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Six3Q62233 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six3Q62233 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Six3Q62233 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Six3Q62233 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.2■□□□□ 0.34
Six3Q62233 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six3Q62233 Flg-201ENSMUST00000050758 1488 ntBASIC17.2■□□□□ 0.34
Six3Q62233 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.2■□□□□ 0.34
Six3Q62233 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Six3Q62233 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Six3Q62233 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Six3Q62233 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Six3Q62233 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.19■□□□□ 0.34
Six3Q62233 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Six3Q62233 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.19■□□□□ 0.34
Six3Q62233 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Six3Q62233 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.18■□□□□ 0.34
Six3Q62233 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Six3Q62233 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six3Q62233 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.18■□□□□ 0.34
Six3Q62233 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Six3Q62233 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.18■□□□□ 0.34
Six3Q62233 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.18■□□□□ 0.34
Six3Q62233 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Six3Q62233 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Six3Q62233 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.17■□□□□ 0.34
Six3Q62233 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Gm11927-201ENSMUST00000118472 759 ntBASIC17.17■□□□□ 0.34
Six3Q62233 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.17■□□□□ 0.34
Six3Q62233 Gm29791-202ENSMUST00000207888 369 ntBASIC17.17■□□□□ 0.34
Six3Q62233 Mtag2-201ENSMUST00000058665 714 ntBASIC17.17■□□□□ 0.34
Six3Q62233 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Six3Q62233 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Six3Q62233 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six3Q62233 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Six3Q62233 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six3Q62233 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six3Q62233 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Six3Q62233 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.16■□□□□ 0.34
Six3Q62233 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms